BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032D03LP1|AL429557
(858 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1390 1661 0.0
>3x_Contig1390
Length = 7609
Score = 1661 bits (834), Expect = 0.0
Identities = 846/854 (99%)
Strand = Plus / Minus
Query: 5 aggacccacactcctaccttckttctaacttggctatggaccagactgttcattgcaaca 64
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4161 aggacccacactcctaccttcgttctaacttggctatggaccagactgttcattgcaaca 4102
Query: 65 tcaggctcatctgctgtcgacaaagagaagtttcttcaatccctaatagataggctagat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4101 tcaggctcatctgctgtcgacaaagagaagtttcttcaatccctaatagataggctagat 4042
Query: 125 gagatggttttgagcccaccatatatggatgattcagaaatatggtatatctttggtctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4041 gagatggttttgagcccaccatatatggatgattcagaaatatggtatatctttggtctc 3982
Query: 185 acacatctagtgatggcatctgagctatcatccaaatttagacaaagtaaggatatatta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3981 acacatctagtgatggcatctgagctatcatccaaatttagacaaagtaaggatatatta 3922
Query: 245 cttggatctcgtgcagatatcgcaagaaatcaagtcattcagcatatcaataatgccaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3921 cttggatctcgtgcagatatcgcaagaaatcaagtcattcagcatatcaataatgccaaa 3862
Query: 305 mattgcctccaaatgtgtaaggcaaacagcaattatgaatttcctgaaaatgtaatcgaa 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3861 aattgcctccaaatgtgtaaggcaaacagcaattatgaatttcctgaaaatgtaatcgaa 3802
Query: 365 caccagttggtacaattagaaagamgtttatatactgacgaactttctgtcaattgcaca 424
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3801 caccagttggtacaattagaaagaagtttatatactgacgaactttctgtcaattgcaca 3742
Query: 425 gatgaatctgccaaatctagcgacgaagatggcattgaacactcatacccaaacgaagac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3741 gatgaatctgccaaatctagcgacgaagatggcattgaacactcatacccaaacgaagac 3682
Query: 485 agtaatttaccggacgttggtcccttggatactcagcaatatgamattgavaatctaata 544
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 3681 agtaatttaccggacgttggtcccttggatactcagcaatatgaaattgaaaatctaata 3622
Query: 545 ccagaagtggagtcagcggaattcactgttcctgctcctatcagatttggttatgaaagt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3621 ccagaagtggagtcagcggaattcactgttcctgctcctatcagatttggttatgaaagt 3562
Query: 605 gactaatattcaataattagaatgamaaattaatcgcatgcattctcatagatatatgtc 664
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3561 gactaatattcaataattagaatgaaaaattaatcgcatgcattctcatagatatatgta 3502
Query: 665 atcataaaacatcctatatgagagcaatatctactctactaccttgctggctttttttta 724
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3501 atcataaaaaatcctatatgagagcaatatctactctactaccttgctggctttttttta 3442
Query: 725 gaagtcctttattctcgtttaacctttttagacagttcctctaatttactctctaaatct 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3441 gaagtcctttattctcgtttaacctttttagacagttcctctaatttactctctaaatct 3382
Query: 785 gcaatttttcgtttcaattgagacgcatcctgatcaataagtagatcctggggtagcacg 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3381 gcaatttttcgtttcaattgagacgcatcctgatcaataagtagatcctggggtagcacg 3322
Query: 845 acagaacccttggt 858
||||||||||||||
Sbjct: 3321 acagaacccttggt 3308
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5451
Number of Sequences: 1807
Number of extensions: 5451
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 858
length of database: 10,358,551
effective HSP length: 16
effective length of query: 842
effective length of database: 10,329,639
effective search space: 8697556038
effective search space used: 8697556038
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)